A recent view about encephalomyocarditis virus circulating in compartmentalised animal population in Northern Italy.

Encephalomyocarditis virus (Picornaviridae, Cardiovirus A) is the causative agent of the homonymous disease, which may induce myocarditis, encephalitis and reproductive disorders in various mammals, especially in swine. Despite the disease occurred endemically in pig farms since 1997, the recent increase of death experimented in Northern Italy prompted to furtherly investigate the evolution of the virus and the actual spread of the infection. Italian EMC viruses, collected between 2013 and 2019, showed an overall antigenic stability. The in-house ELISA Monoclonal Antibodies based, able to reveal changes in seven different antigenic sites, showed only sporadic and occasional mutations in considered samples and the subsequent phylogenetic analysis confirmed antigenic panel's remarks. All the isolates could be classified within a unique lineage, which comprise other European strains and confirm that the viruses currently circulating in Italy developed from a unique common ancestor. Despite the demonstrated stability of virus, some putative newly emerged variants were detected through antigenic profile analysis and phylogenesis. Finally, the serosurvey proved that spread of EMCV is greater than the diffusion of fatal infections would suggest, due to subclinical circulation of EMCV. It demonstrated an increase in the proportion of seropositive farms, if compared with previous data with no remarkable differences between farms with and without clinical evidence of disease.

Double-observer approach with camera traps can correct imperfect detection and improve the accuracy of density estimation of unmarked animal populations.

Camera traps are a powerful tool for wildlife surveys. However, camera traps may not always detect animals passing in front. This constraint may create a substantial bias in estimating critical parameters such as the density of unmarked populations. We proposed the 'double-observer approach' with camera traps to counter the constraint, which involves setting up a paired camera trap at a station and correcting imperfect detection with a reformulated hierarchical capture-recapture model for stratified populations. We performed simulations to evaluate this approach's reliability and determine how to obtain desirable data for this approach. We then applied it to 12 mammals in Japan and Cameroon. The results showed that the model assuming a beta-binomial distribution as detection processes could correct imperfect detection as long as paired camera traps detect animals nearly independently (Correlation coefficient ≤ 0.2). Camera traps should be installed to monitor a predefined small focal area from different directions to satisfy this requirement. The field surveys showed that camera trap could miss animals by 3-40%, suggesting that current density estimation models relying on perfect detection may underestimate animal density by the same order of magnitude. We hope that our approach will be incorporated into existing density estimation models to improve their accuracy.

A Survey of Chinese Pig Farms and Human Healthcare Isolates Reveals Separate Human and Animal Methicillin-Resistant Staphylococcus aureus Populations.

There has been increasing concern that the overuse of antibiotics in livestock farming is contributing to the burden of antimicrobial resistance in people. Farmed animals in Europe and North America, particularly pigs, provide a reservoir for livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA ST398 lineage) found in people. This study is designed to investigate the contribution of MRSA from Chinese pig farms to human infection. A collection of 483 MRSA are isolated from 55 farms and 4 hospitals in central China, a high pig farming density area. CC9 MRSA accounts for 97.2% of all farm isolates, but is not present in hospital isolates. ST398 isolates are found on farms and hospitals, but none of them formed part of the "LA-MRSA ST398 lineage" present in Europe and North America. The hospital ST398 MRSA isolate form a clade that is clearly separate from the farm ST398 isolates. Despite the presence of high levels of MRSA found on Chinese pig farms, the authors find no evidence of them spilling over to the human population. Nevertheless, the ST398 MRSA obtained from hospitals appear to be part of a widely distributed lineage in China. The new animal-adapted ST398 lineage that has emerged in China is of concern.

The present status, distribution, demography, and diet of the Dahl's Jird / Status atual, distribuição, demografia e dieta do Jird de Dahl

Meriones dahli (Shidlovsky, 1962) was previously accepted to be a subspecies of M. meridianus (Pallas, 1773). However, it was later suggested that they are geographically isolated from each other. Although hybridological studies and differences in certain external characteristics support the idea that M. dahli is a separate species, there are still doubts on its species status, and the exact range of its distribution is not known. In this paper, we provide some taxonomic information about the species, and compare these with the information given in previous studies. We argue that some differences exist among Armenian population regarding external measurements. Recent studies indicate that M. dahli is currently only distributed in Turkey, as an endemic mammal species. We provide predictions about the distribution of M. dahli, and report the estimated population size to its maximum value. Food preference studies for this species, conducted under laboratory conditions, are also introduced for the first time. We discuss the ecological data obtained from field studies, and emphasize that the habitat of M. dahli is about to disappear. Consequently, the protection status of this species should urgently be changed to the CR category and conservation studies must be carried out immediately.

Meriones dahli (Shidlovsky, 1962) foi previamente aceito como uma subespécie de M. meridianus (Pallas, 1773). No entanto, mais tarde, foi sugerido que eles estão geograficamente isolados um do outro. Embora estudos hibridológicos e diferenças em certas características externas apoiem a ideia de que M. dahli é uma espécie separada, ainda há dúvidas sobre o status de sua espécie, e a extensão exata de sua distribuição não é conhecida. Neste artigo, fornecemos algumas informações taxonômicas sobre as espécies e as comparamos com as informações fornecidas em estudos anteriores. Argumentamos que existem algumas diferenças entre a espécie armênia em relação às medidas externas. Estudos recentes indicam que M. dahli está atualmente distribuído apenas na Turquia como uma espécie endêmica de mamífero. Fornecemos previsões sobre a distribuição de M. dahli e relatamos o tamanho estimado da população em seu valor máximo. Estudos de preferência alimentar para essa espécie, conduzidos em condições de laboratório, também são introduzidos pela primeira vez. Discutimos sobre os dados ecológicos obtidos em estudos de campo e enfatizamos que o habitat de M. dahli está prestes a desaparecer. Consequentemente, o status de proteção dessa espécie deve ser alterado com urgência para a categoria CR, e estudos de conservação devem ser realizados imediatamente.

Population structure of the Atlantic seabob shrimp Xiphopenaeus kroyeri (Heller, 1862) based on geometric morphometrics / Estructura de la población del camarón langostino del atlántico Xiphopenaeus kroyeri (Heller, 1862) basada en morfometría geométrica

SUMMARY: In 2004, Xiphopenaeus kroyeri, one of major species in commercial fisheries in Brazil was included in the list of brazilian overfished species and, in 2006, two cryptic species were identified in the Atlantic Ocean by molecular approaches: Xiphopenaeus sp. I and II. In 2019, Carvalho-Batista et al. described both Xiphopenaeus sp. I and Xiphopenaeus sp. II and these species were named X. kroyeri and X. dincao, respectively. This study aimed at performing morphometric analysis in order to identify potential fishing stocks of X. kroyeri sensu strictum along Brazilian coast. The results obtained separate Caravelas, Atafona and Balneário Camboriú from all the other populations studied and showed three groups: Ubatuba, Nova Almeida; Ubatuba, Cananéia; Ubatuba, Santos. These results indicate that the maritime limits practiced in closed seasons along Brazil are embracing the detected morphometric stock boundaries observed for Xiphopenaeus kroyeris.s.

RESUMEN: En 2004, Xiphopenaeus kroyeri, una de las principales especies de la pesca comercial en Brasil, fue incluida en la lista de especies brasileñas sobre explotadas y, en 2006, se identificaron dos especies crípticas en el Océano Atlántico mediante enfoques moleculares: Xiphopenaeus sp. I y II. En 2019, Carvalho-Batista et al. describieron tanto Xiphopenaeus sp. I y Xiphopenaeus sp. II y a estas especies denominaron X. kroyeri y X. dincao, respectivamente. Este estudio tuvo como objetivo realizar un análisis morfométrico con el fin de identificar posibles poblaciones de pesca de X. kroyeri sensu strictum a lo largo de la costa brasileña. Los resultados obtenidos en Caravelas, Atafona y Balneário Camboriú se separaron de todas las demás poblaciones estudiadas y mostraron tres grupos: Ubatuba, Nova Almeida; Ubatuba, Cananéia; Ubatuba, Santos. Estos resultados indican que los límites marítimos practicados en temporadas de veda a lo largo de Brasil están abarcando los límites de stock morfométricos observados para Xiphopenaeus kroyeris.s.

A systematic review of waterborne and water-related disease in animal populations of Florida from 1999-2019.

BACKGROUND: Florida's waters are a reservoir for a host of pathogens and toxins. Many of these microorganisms cause water-related diseases in people that are reportable to the Florida Department of Health. Our objective in this review was to ascertain which water-related pathogens and toxins of public health importance have been found in animal populations in Florida over the last twenty years. METHODS: Nineteen databases were searched, including PubMed and Web of Science Core Collection, using keywords and search terms for the waterborne diseases, water-related vector-borne diseases, and water-based toxins reportable to the Florida Department of Health. For inclusion, peer-reviewed journal articles were to be written in English, published between January 1, 1999 and December 31, 2019, and contain primary research findings documenting at least one of the water-related pathogens or toxins of interest in an animal population within Florida during this same time frame. RESULTS: Of over eight thousand initial search results, 65 studies were included for final analysis. The most common animal types implicated in the diseases of interest included marine mammals, fish and shellfish, wild birds, and livestock. Toxins or pathogens most often associated with these animals included toxin-producer Karenia brevis, vibriosis, Escherichia coli, and Salmonellosis. DISCUSSION/CONCLUSION: Findings from this review elucidate the water-related disease-causing pathogens and toxins which have been reported within animal populations in recent Florida history. As most of these diseases are zoonotic, our results suggest a One Health approach is necessary to support and maintain healthy water systems throughout the state of Florida for the protection of both human and animal populations.

Genetic diversity and genomic inbreeding in Japanese Black cows in the islands of Okinawa Prefecture evaluated using single-nucleotide polymorphism array.

Maintaining genetic diversity and inbreeding control are important in Japanese Black cattle production, especially in remote areas such as the islands of Okinawa Prefecture. Using a single-nucleotide polymorphism (SNP) array, we evaluated the genetic diversity and genomic inbreeding in Japanese Black cows from the islands of Okinawa Prefecture and compared them to those from other locations across Japan. Linkage disequilibrium decay was slower in cows in the islands of Okinawa Prefecture. The estimated effective population size declined over time in both populations. The genomic inbreeding coefficient (FROH ) was estimated using long stretches of consecutive homozygous SNPs (runs of homozygosity; ROH). FROH was higher in the cows on the islands of Okinawa Prefecture than on other locations. In total, 818 ROH fragments, including those containing NCAPG and PLAG1, which are major quantitative trait loci for carcass weight in Japanese Black cattle, were present at significantly higher frequencies in cows in the islands of Okinawa Prefecture. This suggests that the ROH fragments are under strong selection and that cows in the islands of Okinawa Prefecture have low genetic diversity and high genomic inbreeding relative to those at other locations. SNP arrays are useful tools for evaluating genetic diversity and genomic inbreeding in cattle.

Improving inference for nonlinear state-space models of animal population dynamics given biased sequential life stage data.

State-space models (SSMs) are a popular tool for modeling animal abundances. Inference difficulties for simple linear SSMs are well known, particularly in relation to simultaneous estimation of process and observation variances. Several remedies to overcome estimation problems have been studied for relatively simple SSMs, but whether these challenges and proposed remedies apply for nonlinear stage-structured SSMs, an important class of ecological models, is less well understood. Here we identify improvements for inference about nonlinear stage-structured SSMs fit with biased sequential life stage data. Theoretical analyses indicate parameter identifiability requires covariates in the state processes. Simulation studies show that plugging in externally estimated observation variances, as opposed to jointly estimating them with other parameters, reduces bias and standard error of estimates. In contrast to previous results for simple linear SSMs, strong confounding between jointly estimated process and observation variance parameters was not found in the models explored here. However, when observation variance was also estimated in the motivating case study, the resulting process variance estimates were implausibly low (near-zero). As SSMs are used in increasingly complex ways, understanding when inference can be expected to be successful, and what aids it, becomes more important. Our study illustrates (a) the need for relevant process covariates and (b) the benefits of using externally estimated observation variances for inference about nonlinear stage-structured SSMs.

Some animals are more equal than others: Validation of a new scale to measure how attitudes to animals depend on species and human purpose of use.

Globally, many millions of animals are used by humans every year and much of this usage causes public concern. A new scale, devised to measure attitudes to animal use in relation to the purpose of use and species, the Animal Purpose Questionnaire (APQ), was completed by in total 483 participants, 415 British nationals and 68 participants from 39 other countries. The APQ was presented in two survey formats, alongside an established Animal Attitudes Scale (AAS). In both surveys, participants also provided demographic details to provide a context to their attitudes to animals. As might be expected, and consistent with the validity of the new scale, overall scores on the AAS and APQ were highly correlated. However, the APQ provided a more differentiated measure of attitudes to animal use across a variety of settings. The results showed that there was overall higher levels of agreement with the use of animals in medical research and basic science, less endorsement for food production and pest control, and the use of animals for other cultural practices was generally disapproved of, irrespective of species. Participants overall disagreed with the use of rabbits, monkeys, badgers, tree shrews (survey 1), chimpanzees, dogs, dolphins and parrots (survey 2), but were neutral about the use of rats, mice, pigs, octopus, chickens, zebrafish (survey 1), carp, chickens, pigs, pigeons, rabbits and rats (survey 2). Interactions between species and purpose were largely driven by the consideration of using diverse species for food production. In general, females and vegetarians expressed less agreement with the use of animals with some differences by purpose of use. Pet keeping consistently predicted reduced willingness to use animals for basic science (only). The APQ provides a new tool to unpack how public attitudes depend on the intersectionality of demographics, species and purpose of use.

Integrative systematics and ecology of a new deep-sea family of tanaidacean crustaceans.

A new family of paratanaoidean Tanaidacea - Paranarthrurellidae fam. nov. - is erected to accommodate two genera without family classification (Paratanaoidea incertae sedis), namely Armatognathia Kudinova-Pasternak, 1987 and Paranarthrurella Lang, 1971. Seven new species of Paranarthrurella and two of Armatognathia are described from material taken in different deep-sea areas of the Atlantic and Pacific oceans. The type species of Paranarthrurella - P. caudata (Kudinova-Pasternak, 1965) - is redescribed based on the paratype. The genus Cheliasetosatanais Larsen and Araújo-Silva, 2014 originally classified within Colletteidae is synonymised with Paranarthrurella, and Arthrura shiinoi Kudinova-Pasternak, 1973 is transferred to Armatognathia. Amended diagnoses of Armatognathia and Paranarthrurella genera are given. Choosing characters for distinguishing and defining both genera was supported by Principal Component Analysis. Designation of the new family is supported by molecular phylogenetic analysis of COI and 18S datasets. The distribution of all species currently included in the new family was visualised and their bathymetric distribution analysed.

Acoustic enrichment can enhance fish community development on degraded coral reef habitat.

Coral reefs worldwide are increasingly damaged by anthropogenic stressors, necessitating novel approaches for their management. Maintaining healthy fish communities counteracts reef degradation, but degraded reefs smell and sound less attractive to settlement-stage fishes than their healthy states. Here, using a six-week field experiment, we demonstrate that playback of healthy reef sound can increase fish settlement and retention to degraded habitat. We compare fish community development on acoustically enriched coral-rubble patch reefs with acoustically unmanipulated controls. Acoustic enrichment enhances fish community development across all major trophic guilds, with a doubling in overall abundance and 50% greater species richness. If combined with active habitat restoration and effective conservation measures, rebuilding fish communities in this manner might accelerate ecosystem recovery at multiple spatial and temporal scales. Acoustic enrichment shows promise as a novel tool for the active management of degraded coral reefs.

Building matrix population models when individuals are non-identifiable.

Matrix Population Models (MPM) are among the most widely used tools in ecology and evolution. These models consider the life cycle of an individual as composed by states to construct a matrix containing the likelihood of transitions between these states as well as sexual and/or asexual per-capita offspring contributions. When individuals are identifiable one can parametrize an MPM based on survival and fertility data and average development times for every state, but some of this information is absent or incomplete for non-cohort data, or for cohort data when individuals are not identifiable. Here we introduce a simple procedure for the parameterization of an MPM that can be used with cohort data when individuals are non-identifiable; among other aspects our procedure is a novelty in that it does not require information on stage development (or stage residence) times, which current procedures require to be estimated externally, and it is a frequent source of error. We exemplify the procedure with a laboratory cohort dataset from Eratyrus mucronatus (Reduviidae, Triatominae). We also show that even if individuals are identifiable and the duration of each stage is externally estimated with no error, our procedure is simpler to use and yields the same MPM parameter estimates.

Identification of halogenated polycyclic aromatic hydrocarbons in biological samples from Alberta Oil-Sands Region.

Halogenated polycyclic aromatic hydrocarbons (HPAHs) were identified in biological samples from the Alberta Oil-Sands Region (AOSR) using gas chromatography coupled with high-resolution time-of-flight mass spectrometry (GC-HRTOF-MS) at a resolving power of 25,000. Knowledge of the electron ionization (EI) fragmentation behavior of individual HPAH isomers, achieved by injecting authentic standards in full-scan MS mode, was paramount in identifying a suite of HPAHs in samples from the AOSR. Confirmation of compounds in biological samples was based on the measured mass accuracy (±3 ppm) of 2 characteristic ions prominent in the EI mass spectra of each compound. Numerous compounds were detected in the high resolution total ion chromatogram in liver extracts of 4 biological species from the AOSR: river otter (Lontra Canadensis), northern pike (Esox lucius), lake whitefish (Coregonus clupeaformis) and snails (Gastropod sp.) many of which remain unidentified. Careful examination of the high-resolution accurate mass data suggests that dichloro-anthracene/phenanthrene, bromo-anthracene/phenanthrene and dibromo-fluorene were present in the biological samples. Lipid corrected concentrations of dichloro-PAHs were estimated to be 16.3 ±â€¯11.4 (n = 4) and 5.5 (n = 1) ng/g in lake whitefish and river otter, respectively. Concentrations of mono-bromo-PAHs were an order of magnitude greater in snails (170.5 ng/g) than in northern pike (12.5 ng/g) while concentrations of dibromo-PAHs were 4 times greater in snails than in northern pike. The detection of these compounds in biota implies that these compounds are bioaccumulative. The liver-based biomagnification factor of the dichloro-PAH congener in the river otter/lake whitefish feeding relationship is much smaller than 1 implying that this compound does not biomagnify.

Reflexión sobre la justificación metodológica del uso de animales en investigación biomédica / Considerations on the methodological justification about the use of animals in biomedical research / Reflexão sobre a justificação metodológica do uso de animais em pesquisa biomédica

La investigación por medio de modelos animales es una práctica que se ha realizado desde hace siglos. Su objetivo principal ha sido conocernos a nosotros mismos a través de ellos. El objetivo de este texto es cuestionar si la justificación metodológica implica una justificación ética que permite usar, dañar o matar animales no humanos en investigación para el beneficio humano. Para ello se realizó una revisión bibliográfica sobre algunos aspectos históricos, así como argumentos a favor y en contra de la investigación biomédica realizada en animales no humanos. Para desarrollar el trabajo se buscó identificar las razones y argumentos metodológicos que sustentan la necesidad de continuar con prácticas que implican daño, dolor, sufrimiento o la muerte de animales. Se encontró que la gran mayoría se sustenta en argumentos enteramente antropocéntricos. Se destaca la existencia de un doble estándar entre animales humanos y no humanos al momento de decidir la realización de investigaciones entre unos y otros.

Research through animal models is a practice that has been carried out for centuries. Its main goal has been to know ourselves through them. The objective of this text is to question whether the methodological justification implies an ethical justification that allows the use, harm or killing of non-human animals in research for the sole human benefit. To this end, a literature review was made on some historical aspects, as well as arguments for and against biomedical research conducted on non-human animals. To develop the work, we sought to identify the reasons and methodological arguments that support the need to continue with practices that involve harm, pain, suffering or the death of animals. It was found that the great majority are based on clearly anthropocentric arguments. The existence of a double standard between human animals and non human animals is highlighted when deciding to carry out investigations between them.

A pesquisa através de modelos animais é uma prática que tem sido realizada há séculos. Seu principal objetivo tem sido nos conhecer através deles. O objetivo deste texto é questionar se a justificativa metodológica implica uma justificativa ética que permita o uso, dano ou morte de animais não humanos em pesquisas para o benefício humano. Para tanto, realizou-se uma revisão bibliográfica sobre alguns aspectos históricos, bem como argumentos a favor e contra a pesquisa biomédica realizada em animais não humanos. Paradesenvolver o trabalho, procuramos identificar as razões e argumentos metodológicos que sustentam a necessidade de continuar com práticas que envolvam dano, dor, sofrimento e / ou a morte de animais. Verificou-se que a grande maioria se baseia em argumentos claramente antropocêntricos. A existência de um duplo padrão entre animais e seres humanos é destacada quando se decide realizar investigações entre eles.

Rainfall trends and variation in the Maasai Mara ecosystem and their implications for animal population and biodiversity dynamics.

Rainfall exerts a controlling influence on the availability and quality of vegetation and surface water for herbivores in African terrestrial ecosystems. We analyse temporal trends and variation in rainfall in the Maasai Mara ecosystem of East Africa and infer their implications for animal population and biodiversity dynamics. The data originated from 15 rain gauges in the Mara region (1965-2015) and one station in Narok Town (1913-2015), in Kenya's Narok County. This is the first comprehensive and most detailed analysis of changes in rainfall in the region of its kind. Our results do not support the current predictions of the International Panel of Climate Change (IPCC) of very likely increases of rainfall over parts of Eastern Africa. The dry season rainfall component increased during 1935-2015 but annual rainfall decreased during 1962-2015 in Narok Town. Monthly rainfall was more stable and higher in the Mara than in Narok Town, likely because the Mara lies closer to the high-precipitation areas along the shores of Lake Victoria. Predominantly deterministic and persistent inter-annual cycles and extremely stable seasonal rainfall oscillations characterize rainfall in the Mara and Narok regions. The frequency of severe droughts increased and floods intensified in the Mara but droughts became less frequent and less severe in Narok Town. The timings of extreme droughts and floods coincided with significant periodicity in rainfall oscillations, implicating strong influences of global atmospheric and oceanic circulation patterns on regional rainfall variability. These changing rainfall patterns have implications for animal population dynamics. The increase in dry season rainfall during 1935-2015 possibly counterbalanced the impacts of resource scarcity generated by the declining annual rainfall during 1965-2015 in Narok Town. However, the increasing rainfall extremes in the Mara can be expected to create conditions conducive to outbreaks of infectious animal diseases and reduced vegetation quality for herbivores, particularly when droughts and floods persist over multiple years. The more extreme wet season rainfall may also alter herbivore space use, including migration patterns.

Mixing rates in weakly differentiated stocks of greater amberjack (Seriola dumerili) in the Gulf of Mexico.

The greater amberjack (Seriola dumerili) is a commercially and recreationally important marine fish species in the southeastern United States, where it has been historically managed as two non-mixing stocks (Gulf of Mexico and Atlantic). Mark-recapture studies and analysis of mitochondrial DNA have suggested the two stocks are demographically independent; however, little is currently known about when and where spawning occurs in Gulf of Mexico amberjack, and whether stock mixture occurs on breeding grounds. The primary objective of this study was to quantify stock mixture among breeding populations of amberjack collected from the Atlantic and Gulf of Mexico. Genetic data based on 11 loci identified very low, though statistically significant differentiation among Gulf of Mexico samples (GST = 0.007, [Formula: see text] = 0.009; all P = 0.001) and between reproductive adults collected from two spawning areas (GST = 0.007, [Formula: see text] = 0.014; all P = 0.001). Naïve Bayesian mixture analysis supported a single genetic cluster [p(S|data) = 0.734] whereas trained clustering (using Atlantic and Gulf spawning fish) gave the highest support to a two-cluster model (p(S|data) = 1.0). Our results support the argument that the genetic structuring of greater amberjack is more complex than the previously assumed two, non-mixing stock model. Although our data provide evidence of limited population structure, we argue in favour of non-panmixia among reproductive fish collected from the Gulf of Mexico and Florida Keys.

Spatial capture-mark-resight estimation of animal population density.

Sightings of previously marked animals can extend a capture-recapture dataset without the added cost of capturing new animals for marking. Combined marking and resighting methods are therefore an attractive option in animal population studies, and there exist various likelihood-based non-spatial models, and some spatial versions fitted by Markov chain Monte Carlo sampling. As implemented to date, the focus has been on modeling sightings only, which requires that the spatial distribution of pre-marked animals is known. We develop a suite of likelihood-based spatial mark-resight models that either include the marking phase ("capture-mark-resight" models) or require a known distribution of marked animals (narrow-sense "mark-resight"). The new models sacrifice some information in the covariance structure of the counts of unmarked animals; estimation is by maximizing a pseudolikelihood with a simulation-based adjustment for overdispersion in the sightings of unmarked animals. Simulations suggest that the resulting estimates of population density have low bias and adequate confidence interval coverage under typical sampling conditions. Further work is needed to specify the conditions under which ignoring covariance results in unacceptable loss of precision, or to modify the pseudolikelihood to include that information. The methods are applied to a study of ship rats Rattus rattus using live traps and video cameras in a New Zealand forest, and to previously published data.

Genetic Characterization of a Captive Colony of Pigtailed Macaques (Macaca nemestrina).

Effective colony management is critical to guarantee the availability of captive NHP as subjects for biomedical research. Pigtailed macaques (Macaca nemestrina) are an important model for the study of human and nonhuman primate diseases and behavior. Johns Hopkins University hosts one of the largest captive colonies of pigtailed macaques in the United States. In this study, we used 56 single-nucleotide polymorphisms (SNP) to characterize this population of pigtailed macaques, understand their population structure, and assess the effectiveness of their colony management. The results demonstrate that the colony has maintained a high level of genetic diversity, with no loss of heterozygosity since its origin, and low levels of inbreeding and genetic subdivision.

Population Genetic Structure of the Cayo Santiago Colony of Rhesus Macaques (Macaca mulatta).

The rhesus macaque population at Cayo Santiago increases annually and is in urgent need of control. In-depth assessments of the colony's population genetic and pedigree structures provide a starting point for improving the colony's long-term management program. We evaluated the degree of genetic variation and coefficients of inbreeding and kinship of the Cayo Santiago colony by using pedigree and short tandem repeat (STR) data from 4738 rhesus macaques, which represent 7 extant social groups and a group of migrant males. Information on each animal's parentage, sex, birth date, and date of death or removal from the island were used to generate estimates of mean kinship, kinship value, gene value, genome uniqueness (GU), founder equivalents (fe), and founder genome equivalents (fg). Pedigree and STR analyses revealed that the social groups have not differentiated genetically from each other due to male-mediated gene flow (that is, FST estimates were in the negative range) and exhibit sufficient genetic variation, with mean estimates of allele numbers and observed and expected heterozygosity of 6.57, 0.72, and 0.70, respectively. Estimates of GU, fe, and fg show that a high effective number of founders has affected the colony's current genetic structure in a positive manner. As demographic changes occur, genetic and pedigree matrices need to be monitored consistently to ensure the health and wellbeing of the Cayo Santiago colony.

Updated checklist of Hemerobiidae (Neuroptera) from Brazil and new distributional records in the Neotropical Region / Checklist dos Hemerobiidae (Neuroptera) do Brasil e novos registros de distribuição para a Região Neotropical

Hemerobiidae (Insecta, Neuroptera) is a cosmopolitan clade that comprises about 600 described species distributed into 26 genera. Since the publication of revisions to Hemerobius, Megalomus, Nusalala and Nomerobius, new records have been added in literature and taxonomic modifications have occurred at the genus level. The aim of this study was to update a checklist of Hemerobiidae species from Brazil and of specimens deposited at Coleção de Invertebrados do Instituto Nacional de Pesquisa da Amazônia (INPA), Manaus, Brazil; in order to summarize the geographical data of species in Brazilian states and in the Neotropical Region and to present new distributional data. The INPA collection holds 19 nominal species (55.2% of the all specimens identified at species level) of hemerobiids into eight genera and six subfamilies, mainly from the Neotropical Region; the remaining studied specimens were identified to the genus level. Megalomus marginatus is reported for the first time in Brazil and Nusalala dispar in Ecuador. Moreover, ten new records for the Brazilian states are presented: two to Nusalala tessellata and Hemerobius, and one each to Megalomus impudicus, Notiobiella maculata, Sympherobius ariasi, Megalomus, Nusalala and Sympherobius.

Hemerobiidae (Insecta, Neuroptera) é um clado cosmopolita com cerca de 600 espécies descritas e distribuídas em 26 gêneros. Eles são predadores de afídeos, coccídeos e outros insetos de corpo macio. Após a publicação das revisões de Hemerobius, Megalomus, Nusalala e Nomerobius ocorreram modificações taxonômicas em nível de gênero e novos registros de distribuição geográfica. O objetivo deste estudo é produzir uma lista das espécies de Hemerobiidae do Brasil e dos espécimes depositados na Coleção de Invertebrados do Instituto Nacional de Pesquisa da Amazônia (INPA), Manaus, Brasil, de forma a sumarizar os dados geográficos das espécies em estados brasileiros e na Região Neotropical e, apresentar novos dados de distribuição geográfica. No INPA existem 19 espécies nominais de Hemerobiidae (55,2% dos exemplares estudados) de oito gêneros e seis subfamílias; o restante dos espécimes estudados foi identificado em nível genérico. Megalomus marginatus é relatada pela primeira vez para o Brasil e Nusalala dispar para o Equador (Celica). Além disso, dez novos registros para os estados brasileiros são apresentados: dois para Nusalala tessellata e Hemerobius, um para Megalomus impudicus, Notiobiella maculata, Sympherobius ariasi, Megalomus, Nusalala e Sympherobius.